The cl-libsvm-format Reference Manual

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The cl-libsvm-format Reference Manual

This is the cl-libsvm-format Reference Manual, version 0.1.0, generated automatically by Declt version 2.4 "Will Decker" on Wed Jun 20 11:13:21 2018 GMT+0.


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1 Introduction

* Cl-Libsvm-Format 

[[http://quickdocs.org/cl-libsvm-format/][http://quickdocs.org/badge/cl-libsvm-format.svg]]
[[https://travis-ci.org/masatoi/cl-libsvm-format][https://travis-ci.org/masatoi/cl-libsvm-format.svg?branch=master]]

A fast LibSVM data format reader for Common Lisp.

** Installation

#+BEGIN_SRC 
ros install masatoi/cl-libsvm-format
#+END_SRC

** Usage

SVMFORMAT:PARSE-FILE returns the dataset list and the estimated number of dimensions of the data. 
One datum is a list in which the first element is a class label or a target of regression, and the rest are alternate with the index and its value.

#+BEGIN_SRC lisp
(ql:quickload :cl-libsvm-format)

(multiple-value-bind (dataset dim)
    (svmformat:parse-file "/home/wiz/datasets/mnist.scale")
  (defparameter mnist-dataset dataset)
  (defparameter mnist-dimension dim))

;;; First datum

(car mnist-dataset)
;; (5 153 0.0117647005 154 0.0705882 155 0.0705882 156 0.0705882 157 0.494118 158
;;  0.533333 159 0.686275 160 0.101961 161 0.65098 162 1.0 163 0.968627 164
;;  0.498039 177 0.117647 178 0.141176 179 0.368627 180 0.603922 181 0.666667 182
;;  0.992157 183 0.992157 184 0.992157 185 0.992157 186 0.992157 187 0.882353 188
;;  0.67451 189 0.992157 190 0.94901997 191 0.764706 192 0.25098 204 0.192157 205
;;  0.933333 206 0.992157 207 0.992157 208 0.992157 209 0.992157 210 0.992157 211
;;  0.992157 212 0.992157 213 0.992157 214 0.984314 215 0.364706 216 0.321569 217
;;  0.321569 218 0.219608 219 0.152941 232 0.0705882 233 0.858824 234 0.992157 235
;;  0.992157 236 0.992157 237 0.992157 238 0.992157 239 0.776471 240 0.713725 241
;;  0.968627 242 0.945098 261 0.313725 262 0.611765 263 0.419608 264 0.992157 265
;;  0.992157 266 0.803922 267 0.0431373 269 0.168627 270 0.603922 290 0.054902 291
;;  0.00392157 292 0.603922 293 0.992157 294 0.352941 320 0.545098 321 0.992157
;;  322 0.745098 323 0.00784314 348 0.0431373 349 0.745098 350 0.992157 351
;;  0.27451 377 0.137255 378 0.945098 379 0.882353 380 0.627451 381 0.423529 382
;;  0.00392157 406 0.317647 407 0.941176 408 0.992157 409 0.992157 410 0.466667
;;  411 0.0980392 435 0.176471 436 0.729412 437 0.992157 438 0.992157 439 0.588235
;;  440 0.105882 464 0.0627451 465 0.364706 466 0.988235 467 0.992157 468 0.733333
;;  494 0.976471 495 0.992157 496 0.976471 497 0.25098 519 0.180392 520 0.509804
;;  521 0.717647 522 0.992157 523 0.992157 524 0.811765 525 0.00784314 545
;;  0.152941 546 0.580392 547 0.898039 548 0.992157 549 0.992157 550 0.992157 551
;;  0.980392 552 0.713725 571 0.094117604 572 0.447059 573 0.866667 574 0.992157
;;  575 0.992157 576 0.992157 577 0.992157 578 0.788235 579 0.305882 597 0.0901961
;;  598 0.258824 599 0.835294 600 0.992157 601 0.992157 602 0.992157 603 0.992157
;;  604 0.776471 605 0.317647 606 0.00784314 623 0.0705882 624 0.670588 625
;;  0.858824 626 0.992157 627 0.992157 628 0.992157 629 0.992157 630 0.764706 631
;;  0.313725 632 0.0352941 649 0.215686 650 0.67451 651 0.886275 652 0.992157 653
;;  0.992157 654 0.992157 655 0.992157 656 0.956863 657 0.521569 658 0.0431373 677
;;  0.533333 678 0.992157 679 0.992157 680 0.992157 681 0.831373 682 0.529412 683
;;  0.517647 684 0.0627451)

;;; Number of features

mnist-dimension ; => 780
#+END_SRC

** Author
Satoshi Imai (satoshi.imai@gmail.com)

** Licence
This software is released under the MIT License, see LICENSE.txt.


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2 Systems

The main system appears first, followed by any subsystem dependency.


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2.1 cl-libsvm-format

Author

Satoshi Imai

License

MIT

Description

A fast LibSVM data format reader for Common Lisp

Long Description

* Cl-Libsvm-Format

[[http://quickdocs.org/cl-libsvm-format/][http://quickdocs.org/badge/cl-libsvm-format.svg]] [[https://travis-ci.org/masatoi/cl-libsvm-format][https://travis-ci.org/masatoi/cl-libsvm-format.svg?branch=master]]

A fast LibSVM data format reader for Common Lisp.

** Installation

#+BEGIN_SRC
ros install masatoi/cl-libsvm-format
#+END_SRC

** Usage

SVMFORMAT:PARSE-FILE returns the dataset list and the estimated number of dimensions of the data.
One datum is a list in which the first element is a class label or a target of regression, and the rest are alternate with the index and its value.

#+BEGIN_SRC lisp
(ql:quickload :cl-libsvm-format)

(multiple-value-bind (dataset dim)
(svmformat:parse-file "/home/wiz/datasets/mnist.scale")
(defparameter mnist-dataset dataset)
(defparameter mnist-dimension dim))

;;; First datum

(car mnist-dataset)
;; (5 153 0.0117647005 154 0.0705882 155 0.0705882 156 0.0705882 157 0.494118 158
;; 0.533333 159 0.686275 160 0.101961 161 0.65098 162 1.0 163 0.968627 164
;; 0.498039 177 0.117647 178 0.141176 179 0.368627 180 0.603922 181 0.666667 182
;; 0.992157 183 0.992157 184 0.992157 185 0.992157 186 0.992157 187 0.882353 188
;; 0.67451 189 0.992157 190 0.94901997 191 0.764706 192 0.25098 204 0.192157 205
;; 0.933333 206 0.992157 207 0.992157 208 0.992157 209 0.992157 210 0.992157 211
;; 0.992157 212 0.992157 213 0.992157 214 0.984314 215 0.364706 216 0.321569 217
;; 0.321569 218 0.219608 219 0.152941 232 0.0705882 233 0.858824 234 0.992157 235
;; 0.992157 236 0.992157 237 0.992157 238 0.992157 239 0.776471 240 0.713725 241
;; 0.968627 242 0.945098 261 0.313725 262 0.611765 263 0.419608 264 0.992157 265
;; 0.992157 266 0.803922 267 0.0431373 269 0.168627 270 0.603922 290 0.054902 291
;; 0.00392157 292 0.603922 293 0.992157 294 0.352941 320 0.545098 321 0.992157
;; 322 0.745098 323 0.00784314 348 0.0431373 349 0.745098 350 0.992157 351
;; 0.27451 377 0.137255 378 0.945098 379 0.882353 380 0.627451 381 0.423529 382
;; 0.00392157 406 0.317647 407 0.941176 408 0.992157 409 0.992157 410 0.466667
;; 411 0.0980392 435 0.176471 436 0.729412 437 0.992157 438 0.992157 439 0.588235
;; 440 0.105882 464 0.0627451 465 0.364706 466 0.988235 467 0.992157 468 0.733333
;; 494 0.976471 495 0.992157 496 0.976471 497 0.25098 519 0.180392 520 0.509804
;; 521 0.717647 522 0.992157 523 0.992157 524 0.811765 525 0.00784314 545
;; 0.152941 546 0.580392 547 0.898039 548 0.992157 549 0.992157 550 0.992157 551
;; 0.980392 552 0.713725 571 0.094117604 572 0.447059 573 0.866667 574 0.992157
;; 575 0.992157 576 0.992157 577 0.992157 578 0.788235 579 0.305882 597 0.0901961
;; 598 0.258824 599 0.835294 600 0.992157 601 0.992157 602 0.992157 603 0.992157
;; 604 0.776471 605 0.317647 606 0.00784314 623 0.0705882 624 0.670588 625
;; 0.858824 626 0.992157 627 0.992157 628 0.992157 629 0.992157 630 0.764706 631
;; 0.313725 632 0.0352941 649 0.215686 650 0.67451 651 0.886275 652 0.992157 653
;; 0.992157 654 0.992157 655 0.992157 656 0.956863 657 0.521569 658 0.0431373 677
;; 0.533333 678 0.992157 679 0.992157 680 0.992157 681 0.831373 682 0.529412 683
;; 0.517647 684 0.0627451)

;;; Number of features

mnist-dimension ; => 780
#+END_SRC

** Author
Satoshi Imai (satoshi.imai@gmail.com)

** Licence
This software is released under the MIT License, see LICENSE.txt.

Version

0.1.0

Dependency

alexandria

Source

cl-libsvm-format.asd (file)

Component

src (module)


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3 Modules

Modules are listed depth-first from the system components tree.


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3.1 cl-libsvm-format/src

Parent

cl-libsvm-format (system)

Location

src/

Components

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4 Files

Files are sorted by type and then listed depth-first from the systems components trees.


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4.1 Lisp


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4.1.1 cl-libsvm-format.asd

Location

cl-libsvm-format.asd

Systems

cl-libsvm-format (system)


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4.1.2 cl-libsvm-format/src/parse-float.lisp

Parent

src (module)

Location

src/parse-float.lisp

Packages

svmformat.parse-float

Exported Definitions

parse-float (function)

Internal Definitions

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4.1.3 cl-libsvm-format/src/cl-libsvm-format.lisp

Dependency

parse-float.lisp (file)

Parent

src (module)

Location

src/cl-libsvm-format.lisp

Packages

cl-libsvm-format

Exported Definitions
Internal Definitions

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5 Packages

Packages are listed by definition order.


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5.1 svmformat.parse-float

Source

parse-float.lisp (file)

Use List
Used By List

cl-libsvm-format

Exported Definitions

parse-float (function)

Internal Definitions

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5.2 cl-libsvm-format

Source

cl-libsvm-format.lisp (file)

Nickname

svmformat

Use List
Exported Definitions
Internal Definitions

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6 Definitions

Definitions are sorted by export status, category, package, and then by lexicographic order.


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6.1 Exported definitions


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6.1.1 Functions

Function: parse-file FILE &key EXTERNAL-FORMAT BUFFER-SIZE FIELD-SIZE
Package

cl-libsvm-format

Source

cl-libsvm-format.lisp (file)

Function: parse-float STRING &key START END RADIX JUNK-ALLOWED DECIMAL-CHARACTER EXPONENT-CHARACTER

Similar to PARSE-INTEGER, but parses a floating point value and returns the value as the specified TYPE (by default *READ-DEFAULT-FLOAT-FORMAT*). The DECIMAL-CHARACTER (by default #.) specifies the separator between the integer and decimal parts, and the EXPONENT-CHARACTER (by default #e, case insensitive) specifies the character before the exponent. Note that the exponent is only parsed if RADIX is 10.

Package

svmformat.parse-float

Source

parse-float.lisp (file)

Function: parse-stream ()
Package

cl-libsvm-format

Source

cl-libsvm-format.lisp (file)


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6.2 Internal definitions


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6.2.1 Constants

Constant: +whitespace-characters+

List of whitespace characters

Package

svmformat.parse-float

Source

parse-float.lisp (file)


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6.2.2 Special variables

Special Variable: *optimize-settings*
Package

cl-libsvm-format

Source

cl-libsvm-format.lisp (file)


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6.2.3 Macros

Macro: defn FUNCTION-SPEC (&rest ARG-SPECS) &body BODY
Package

cl-libsvm-format

Source

cl-libsvm-format.lisp (file)

Macro: tlet BINDINGS &body BODY
Package

cl-libsvm-format

Source

cl-libsvm-format.lisp (file)


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6.2.4 Functions

Function: %make-state &key (BUFFER BUFFER) (FIELD FIELD) (OFFSET OFFSET) (SPACE-COUNT SPACE-COUNT) (TAG TAG) (MAX-DIM MAX-DIM) (LABEL-TYPE LABEL-TYPE) (ROW ROW) (ROW-PTR ROW-PTR) (RESULT RESULT) (RESULT-PTR RESULT-PTR)
Package

cl-libsvm-format

Source

cl-libsvm-format.lisp (file)

Function: cell-finish ()
Package

cl-libsvm-format

Source

cl-libsvm-format.lisp (file)

Function: cell-input ()
Package

cl-libsvm-format

Source

cl-libsvm-format.lisp (file)

Function: copy-state INSTANCE
Package

cl-libsvm-format

Source

cl-libsvm-format.lisp (file)

Function: finish STATE
Package

cl-libsvm-format

Source

cl-libsvm-format.lisp (file)

Function: first-label-integer-p FILE &key EXTERNAL-FORMAT
Package

cl-libsvm-format

Source

cl-libsvm-format.lisp (file)

Function: make-state BUFFER-SIZE FIELD-SIZE &key LABEL-TYPE
Package

cl-libsvm-format

Source

cl-libsvm-format.lisp (file)

Function: parse ()
Package

cl-libsvm-format

Source

cl-libsvm-format.lisp (file)

Function: parse-integer-only STRING &key START END RADIX ALLOW-SIGN

Parse an integer from a string, without skipping whitespaces. Returns three values: the integer, the position in the string that ended the parsing, and a boolean which is T if the parsing ended due to a whitespace or end of the string, and NIL otherwise. If allow-sign is NIL (T by default), also signs are not allowed in the string (i.e. cannot start with #+ or #-).

Package

svmformat.parse-float

Source

parse-float.lisp (file)

Function: print-state1 STATE
Package

cl-libsvm-format

Source

cl-libsvm-format.lisp (file)

Function: print-state2 STATE
Package

cl-libsvm-format

Source

cl-libsvm-format.lisp (file)

Function: print-state3 STATE
Package

cl-libsvm-format

Source

cl-libsvm-format.lisp (file)

Function: row-finish ()
Package

cl-libsvm-format

Source

cl-libsvm-format.lisp (file)

Function: sign-char-p CHARACTER

Predicate for testing if CHARACTER is a sign character (i.e. #+ or #-).

Package

svmformat.parse-float

Source

parse-float.lisp (file)

Function: state-buffer INSTANCE
Function: (setf state-buffer) VALUE INSTANCE
Package

cl-libsvm-format

Source

cl-libsvm-format.lisp (file)

Function: state-field INSTANCE
Function: (setf state-field) VALUE INSTANCE
Package

cl-libsvm-format

Source

cl-libsvm-format.lisp (file)

Function: state-label-type INSTANCE
Function: (setf state-label-type) VALUE INSTANCE
Package

cl-libsvm-format

Source

cl-libsvm-format.lisp (file)

Function: state-max-dim INSTANCE
Function: (setf state-max-dim) VALUE INSTANCE
Package

cl-libsvm-format

Source

cl-libsvm-format.lisp (file)

Function: state-offset INSTANCE
Function: (setf state-offset) VALUE INSTANCE
Package

cl-libsvm-format

Source

cl-libsvm-format.lisp (file)

Function: state-p OBJECT
Package

cl-libsvm-format

Source

cl-libsvm-format.lisp (file)

Function: state-result INSTANCE
Function: (setf state-result) VALUE INSTANCE
Package

cl-libsvm-format

Source

cl-libsvm-format.lisp (file)

Function: state-result-ptr INSTANCE
Function: (setf state-result-ptr) VALUE INSTANCE
Package

cl-libsvm-format

Source

cl-libsvm-format.lisp (file)

Function: state-row INSTANCE
Function: (setf state-row) VALUE INSTANCE
Package

cl-libsvm-format

Source

cl-libsvm-format.lisp (file)

Function: state-row-ptr INSTANCE
Function: (setf state-row-ptr) VALUE INSTANCE
Package

cl-libsvm-format

Source

cl-libsvm-format.lisp (file)

Function: state-space-count INSTANCE
Function: (setf state-space-count) VALUE INSTANCE
Package

cl-libsvm-format

Source

cl-libsvm-format.lisp (file)

Function: state-tag INSTANCE
Function: (setf state-tag) VALUE INSTANCE
Package

cl-libsvm-format

Source

cl-libsvm-format.lisp (file)

Function: whitespace-char-p CHARACTER

Predicate for testing if CHARACTER is a whitespace character.

Package

svmformat.parse-float

Source

parse-float.lisp (file)


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6.2.5 Structures

Structure: state ()
Package

cl-libsvm-format

Source

cl-libsvm-format.lisp (file)

Direct superclasses

structure-object (structure)

Direct slots
Slot: buffer
Type

(simple-array character)

Initform

""

Readers

state-buffer (function)

Writers

(setf state-buffer) (function)

Slot: field
Type

(simple-array character)

Initform

""

Readers

state-field (function)

Writers

(setf state-field) (function)

Slot: offset
Type

fixnum

Initform

0

Readers

state-offset (function)

Writers

(setf state-offset) (function)

Slot: space-count
Type

fixnum

Initform

0

Readers

state-space-count (function)

Writers

(setf state-space-count) (function)

Slot: tag
Type

keyword

Initform

:start

Readers

state-tag (function)

Writers

(setf state-tag) (function)

Slot: max-dim
Type

fixnum

Initform

0

Readers

state-max-dim (function)

Writers

(setf state-max-dim) (function)

Slot: label-type
Readers

state-label-type (function)

Writers

(setf state-label-type) (function)

Slot: row
Readers

state-row (function)

Writers

(setf state-row) (function)

Slot: row-ptr
Readers

state-row-ptr (function)

Writers

(setf state-row-ptr) (function)

Slot: result
Readers

state-result (function)

Writers

(setf state-result) (function)

Slot: result-ptr
Readers

state-result-ptr (function)

Writers

(setf state-result-ptr) (function)


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6.2.6 Types

Type: bounding-index ()

A valid upper bound to a string.

Package

svmformat.parse-float

Source

parse-float.lisp (file)

Type: string-index ()

A valid string index.

Package

svmformat.parse-float

Source

parse-float.lisp (file)

Type: valid-radix ()

A valid Common Lisp radix.

Package

svmformat.parse-float

Source

parse-float.lisp (file)


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Appendix A Indexes


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A.1 Concepts

Jump to:   C   F   L   M  
Index Entry  Section

C
cl-libsvm-format.asd: The cl-libsvm-format<dot>asd file
cl-libsvm-format/src: The cl-libsvm-format/src module
cl-libsvm-format/src/cl-libsvm-format.lisp: The cl-libsvm-format/src/cl-libsvm-format<dot>lisp file
cl-libsvm-format/src/parse-float.lisp: The cl-libsvm-format/src/parse-float<dot>lisp file

F
File, Lisp, cl-libsvm-format.asd: The cl-libsvm-format<dot>asd file
File, Lisp, cl-libsvm-format/src/cl-libsvm-format.lisp: The cl-libsvm-format/src/cl-libsvm-format<dot>lisp file
File, Lisp, cl-libsvm-format/src/parse-float.lisp: The cl-libsvm-format/src/parse-float<dot>lisp file

L
Lisp File, cl-libsvm-format.asd: The cl-libsvm-format<dot>asd file
Lisp File, cl-libsvm-format/src/cl-libsvm-format.lisp: The cl-libsvm-format/src/cl-libsvm-format<dot>lisp file
Lisp File, cl-libsvm-format/src/parse-float.lisp: The cl-libsvm-format/src/parse-float<dot>lisp file

M
Module, cl-libsvm-format/src: The cl-libsvm-format/src module

Jump to:   C   F   L   M  

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A.2 Functions

Jump to:   %   (  
C   D   F   M   P   R   S   T   W  
Index Entry  Section

%
%make-state: Internal functions

(
(setf state-buffer): Internal functions
(setf state-field): Internal functions
(setf state-label-type): Internal functions
(setf state-max-dim): Internal functions
(setf state-offset): Internal functions
(setf state-result): Internal functions
(setf state-result-ptr): Internal functions
(setf state-row): Internal functions
(setf state-row-ptr): Internal functions
(setf state-space-count): Internal functions
(setf state-tag): Internal functions

C
cell-finish: Internal functions
cell-input: Internal functions
copy-state: Internal functions

D
defn: Internal macros

F
finish: Internal functions
first-label-integer-p: Internal functions
Function, %make-state: Internal functions
Function, (setf state-buffer): Internal functions
Function, (setf state-field): Internal functions
Function, (setf state-label-type): Internal functions
Function, (setf state-max-dim): Internal functions
Function, (setf state-offset): Internal functions
Function, (setf state-result): Internal functions
Function, (setf state-result-ptr): Internal functions
Function, (setf state-row): Internal functions
Function, (setf state-row-ptr): Internal functions
Function, (setf state-space-count): Internal functions
Function, (setf state-tag): Internal functions
Function, cell-finish: Internal functions
Function, cell-input: Internal functions
Function, copy-state: Internal functions
Function, finish: Internal functions
Function, first-label-integer-p: Internal functions
Function, make-state: Internal functions
Function, parse: Internal functions
Function, parse-file: Exported functions
Function, parse-float: Exported functions
Function, parse-integer-only: Internal functions
Function, parse-stream: Exported functions
Function, print-state1: Internal functions
Function, print-state2: Internal functions
Function, print-state3: Internal functions
Function, row-finish: Internal functions
Function, sign-char-p: Internal functions
Function, state-buffer: Internal functions
Function, state-field: Internal functions
Function, state-label-type: Internal functions
Function, state-max-dim: Internal functions
Function, state-offset: Internal functions
Function, state-p: Internal functions
Function, state-result: Internal functions
Function, state-result-ptr: Internal functions
Function, state-row: Internal functions
Function, state-row-ptr: Internal functions
Function, state-space-count: Internal functions
Function, state-tag: Internal functions
Function, whitespace-char-p: Internal functions

M
Macro, defn: Internal macros
Macro, tlet: Internal macros
make-state: Internal functions

P
parse: Internal functions
parse-file: Exported functions
parse-float: Exported functions
parse-integer-only: Internal functions
parse-stream: Exported functions
print-state1: Internal functions
print-state2: Internal functions
print-state3: Internal functions

R
row-finish: Internal functions

S
sign-char-p: Internal functions
state-buffer: Internal functions
state-field: Internal functions
state-label-type: Internal functions
state-max-dim: Internal functions
state-offset: Internal functions
state-p: Internal functions
state-result: Internal functions
state-result-ptr: Internal functions
state-row: Internal functions
state-row-ptr: Internal functions
state-space-count: Internal functions
state-tag: Internal functions

T
tlet: Internal macros

W
whitespace-char-p: Internal functions

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A.3 Variables

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Index Entry  Section

*
*optimize-settings*: Internal special variables

+
+whitespace-characters+: Internal constants

B
buffer: Internal structures

C
Constant, +whitespace-characters+: Internal constants

F
field: Internal structures

L
label-type: Internal structures

M
max-dim: Internal structures

O
offset: Internal structures

R
result: Internal structures
result-ptr: Internal structures
row: Internal structures
row-ptr: Internal structures

S
Slot, buffer: Internal structures
Slot, field: Internal structures
Slot, label-type: Internal structures
Slot, max-dim: Internal structures
Slot, offset: Internal structures
Slot, result: Internal structures
Slot, result-ptr: Internal structures
Slot, row: Internal structures
Slot, row-ptr: Internal structures
Slot, space-count: Internal structures
Slot, tag: Internal structures
space-count: Internal structures
Special Variable, *optimize-settings*: Internal special variables

T
tag: Internal structures

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A.4 Data types

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Index Entry  Section

B
bounding-index: Internal types

C
cl-libsvm-format: The cl-libsvm-format system
cl-libsvm-format: The cl-libsvm-format package

P
Package, cl-libsvm-format: The cl-libsvm-format package
Package, svmformat.parse-float: The svmformat<dot>parse-float package

S
state: Internal structures
string-index: Internal types
Structure, state: Internal structures
svmformat.parse-float: The svmformat<dot>parse-float package
System, cl-libsvm-format: The cl-libsvm-format system

T
Type, bounding-index: Internal types
Type, string-index: Internal types
Type, valid-radix: Internal types

V
valid-radix: Internal types

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